BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016G11SP1|AL427073
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1449 1455 0.0
>3x_Contig1449
Length = 7865
Score = 1455 bits (703), Expect = 0.0
Identities = 818/893 (91%), Gaps = 1/893 (0%)
Strand = Plus / Minus
Query: 1 tgatcagaactgctgcagtgatctatatacattttcatatatattcatataagtagccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4554 tgatcagaactgctgcagtgatctatatacattttcatatatattcatataagtagccat 4495
Query: 61 acagatgagccatggctaaatgttatatgtacttcctaccatttctacctctgtkctcat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4494 acagatgagccatggctaaatgttatatgtacttcctaccatttctacctctgttctcat 4435
Query: 121 atctacgcagttctcctacattgtgcccactggccaagcataactgaaccactacctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4434 atctacgcagttctcctacattgtgcccactggccaagcataactgaaccactacctctg 4375
Query: 181 tatgcatgagtrattksttgatcgatgactgattccaaaataacgatggaaaarattatt 240
||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4374 tatgcatgagtaatttcttgatcgatgactgattccaaaataacgatggaaaaaattatt 4315
Query: 241 ccagtcaaacaaaaaaaaaaaaaaaaakggcaactcagsgaatsgcacatataargrraa 300
||||||||||||||||||||||||||| |||||||||| |||| |||||||||| | ||
Sbjct: 4314 ccagtcaaacaaaaaaaaaaaaaaaaatggcaactcagcgaatcgcacatataaagaaaa 4255
Query: 301 csgttttsagtttcccattcgctaagtatttscattrggtatctrargtrtgagtkaact 360
| ||||| ||||||||||||||||||||||| |||| ||||||| | || ||||| ||||
Sbjct: 4254 ccgttttcagtttcccattcgctaagtatttccattaggtatctaaagtatgagttaact 4195
Query: 361 cgtaaagtactgaamagcattatkgtgtaaksgargttaagaccagctctatccatctgc 420
|||||||||||||| |||||||| || ||| || |||||||||||||||||||||||||
Sbjct: 4194 cgtaaagtactgaacagcattattgtctaatcgaagttaagaccagctctatccatctgc 4135
Query: 421 rggacaaatkrgrgggttggcrggrragkgttgatacctgcgttkggrgkgatagkgagc 480
|||||||| ||||| || || || |||||||||||| || | ||||| ||||
Sbjct: 4134 aggacaaattaaagggtttgcaggaaagtgttgatacctgccttttcagtgatagtgagc 4075
Query: 481 caagccaactgtgtgggstkckkggrrggrttkggattagataargargargaagaagaa 540
|||||||||||| | | | || || |||||||||| || || |||||||||
Sbjct: 4074 caagccaactgttttatcttctttaaaggattttgattagataaagaagaagaagaagaa 4015
Query: 541 gaagaagaagaagaagaagaagaagaagaagaaaaaatgtctgtgccatctgggagattg 600
||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||
Sbjct: 4014 gaagaagaagaagaagaagaagaagaagaagaaaacatgtctgtcccatctgcgagattg 3955
Query: 601 tkgatgtcaacgaagggtttgadtccatctcgtttgagcaaagttgcttcgattttggct 660
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3954 ttgatgtcaacgaagggtttgaatccatctcgtttgagcaaagttgcttcgattttggct 3895
Query: 661 agatgttctccttcaatcccaaagagagttggttattcgaraagatttgtttctagtgct 720
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3894 agatgttctccttcaatcccaaagagagttggttattcgaaaagatttgtttctagtgct 3835
Query: 721 aasgstgttggdtctactgggactagatctacggttattcaattattgarcaatattggg 780
|| | |||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3834 aacggtgttggatctactgggactagatctacggttattcaattattgaacaatattgga 3775
Query: 781 tcgaraagagaagtagaacaatatttgargtacttcacttcggtttcgcaacagcaattt 840
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3774 tcgaaaagagaagtagaacaatatttgaagtacttcacttcggtttcgcaacagcaattt 3715
Query: 841 gctgttattaaagtcggtggtgctattatcagtgat-ahttgcaggaattggc 892
|||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 3714 gctgttattaaagtcggtggtgctattatcagtgataacttgcaggaattggc 3662
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.720 1.36
Gapped
Lambda K H
1.43 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,192
Number of Sequences: 1807
Number of extensions: 20192
Number of successful extensions: 5589
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (29.0 bits)
S1: 11 (23.2 bits)
S2: 48 (99.8 bits)